- r -

• read() : Printed_structure , Printed_apical_hypha , Printed_spore , Alternaria , Printed_lateral_hypha
• read_apical() : Printed_structure
• read_base_psi() : Printed_structure
• read_base_theta() : Printed_structure
• read_centroid() : Printed_structure
• read_id() : Printed_structure
• read_lat_dist() : Printed_lateral_structure
• read_laterals() : Printed_structure
• read_length() : Printed_structure
• read_level() : Printed_structure
• read_log_prob() : Printed_structure
• read_opacity() : Printed_structure
• read_parent() : Printed_structure
• read_psi() : Printed_structure
• read_theta() : Printed_structure
• read_width() : Printed_structure
• recursively_check_structure() : Structure
• recursively_clone() : Structure , Apical_structure , Lateral_structure
• recursively_convert() : Printed_structure , Printed_apical_structure , Printed_lateral_structure
• recursively_draw_in_matblock_f() : Structure
• recursively_print() : Structure
• recursively_update_level() : Alternaria
• recursively_update_levels() : Structure
• recursively_update_R() : Structure
• remove_apical_hypha() : Alternaria
• remove_lateral() : Structure
• remove_lateral_hypha() : Alternaria
• remove_spore() : Alternaria
• replace() : Apical_structure , Apical_hypha , Spore
• replace_apical_hypha_with_spore() : Alternaria
• replace_spore_with_apical_hypha() : Alternaria
• run() : Sampler_jump_move , Structure_opacity_move , PSF_move , Sampler_move , Apical_structure_position_move , Sampler , Structure_resize_move , Lateral_structure_lat_dist_move , PSF_alpha_move , PSF_beta_move , PSF_gamma_move , Structure_rotate_move , Sampler , Imaging_bg_move
• run_1() : Spore_birth_death_move , Apical_hypha_split_merge_apical_move , Apical_hypha_birth_death_move , Apical_hypha_split_merge_lateral_move , Lateral_hypha_birth_death_move , Spore_split_merge_2_apical_move , Spore_split_merge_spore_move , Spore_transition_apical_move , Sampler_jump_move
• run_2() : Apical_hypha_split_merge_lateral_move , Sampler_jump_move , Apical_hypha_split_merge_apical_move , Spore_split_merge_2_apical_move , Spore_split_merge_spore_move , Spore_birth_death_move , Lateral_hypha_birth_death_move , Spore_transition_apical_move , Apical_hypha_birth_death_move