Alternaria
fit cylinders and ellipsoids to fungus
Class List
Here are the classes, structs, unions and interfaces with brief descriptions:
AlternariaAlternaria composed of Structure elements
Alternaria_densityParameters for density functions over an Alternaria
Alternaria_gen_modesModes the viewer can be in
Alternaria_modelModel of Alternaria
Alternaria_model_densityParameters for density functions over an Alternaria_model
Alternaria_viewer_modesModes the viewer can be in
Apical_errorException in the apical growth element of a Structure
Apical_hyphaAn Alterneria hypha modeled as a cylinder
Apical_hypha_birth_death_move
Apical_hypha_densityParameters for density functions over an Alternaria Apical_hypha
Apical_hypha_split_merge_apical_move
Apical_hypha_split_merge_lateral_move
Apical_structureAn Alternaria structure element either postioned apically along another Apical_structure element or as a root element
Apical_structure_densityParameters for density functions over an Alternaria Apical_structure element
Apical_structure_position_move
Density::Gaussian_paramsParameters for a Gaussian density function
Imaging_bg_move
Imaging_modelModel of the imaging system
Imaging_model_densityParameters for density functions over an Imaging_model
Imaging_scaleScale of each viewing world dimension in the imaging system
Imaging_windowImages of windows to analyze
Lateral_hyphaAn Alterneria hypha modeled as a cylinder
Lateral_hypha_birth_death_move
Lateral_hypha_densityParameters for density functions over an Alternaria Lateral_hypha
Lateral_structureAn Alternaria structure element postioned laterally along another structure element
Lateral_structure_densityParameters for density functions over an Alternaria Lateral_structure element
Lateral_structure_lat_dist_move
PrintableAbstract class used to print objects and their members
Printed_apical_hyphaA Alternaria apical hypha element that was printed to a file
Printed_apical_structureAn apical Alternaria structure element that was printed to a file
Printed_lateral_hyphaA Alternaria lateral hypha element that was printed to a file
Printed_lateral_structureA lateral Alternaria structure element that was printed to a file
Printed_sporeA Alternaria spore element that was printed to a file
Printed_structureAn Alternaria structure element that was printed to a file
PSFDescretized point spread function
PSF_alpha_move
PSF_beta_move
PSF_delta_modelDelta function model of the point spread function
PSF_gamma_move
PSF_gauss_modelGaussian function model of the point spread function
PSF_modelModel of the point spread function
PSF_model_densityParameters for density functions over a PSF_model
PSF_move
PSF_paddingPadding components for PSF::h
Sampler
Sampler_diffusion_move
Sampler_jump_move
Sampler_move
Sampler_move_parameters
Sampler_move_params
SporeAn Alterneria spore modeled as a symmetric ellipsoid
Spore_birth_death_move
Spore_densityParameters for density functions over an Alternaria Spore
Spore_split_merge_2_apical_move
Spore_split_merge_spore_move
Spore_transition_apical_move
StructureAn Alternaria structure element
Structure_densityParameters for density functions over an Alternaria Structure element
Structure_opacity_move
Structure_resize_move
Structure_rotate_move
Density::Uniform_paramsParameters for a uniform density function