File List

Here is a list of all files with brief descriptions:

haplo_cluster.c [code]	Clusters a set of Y-STR samples
haplo_groups.c [code]	Provides a mapping between haplo groups and their sequential ordering
haplo_groups.h [code]	Provides a mapping between haplo groups and their sequential ordering
haplo_predict.c [code]	Predicts a Y-STR haplotype label using a set of trained classifiers
haplo_test.c [code]	Test the classification accuracy of haplotype labels from Y-STR data
haplo_train.c [code]	Trains a set of Y-STR haplotype label classifiers
input.c [code]	Read the a row-by-row collection of data samples from a file
input.h [code]	Read the a row-by-row collection of data samples from a file
mv_gmm.c [code]	Multivariate Gaussian mixture model classifier
mv_gmm.h [code]	Multivariate Gaussian mixture model classifier
nb_freq.c [code]	Naive Bayes non-parametric marker frequency classifier
nb_freq.h [code]	Naive Bayes non-parametric marker frequency classifier
nb_gauss.c [code]	Naive Bayes Gaussian classifier
nb_gauss.h [code]	Naive Bayes Gaussian classifier
nb_gmm.c [code]	Naive Bayes Gaussian mixture model classifier
nb_gmm.h [code]	Naive Bayes Gaussian mixture model classifier
options.c [code]	Options used for all haplo programs
options.h [code]	Options used for all haplo programs
output.c [code]	Output related functions
output.h [code]	Output related functions
svm_tree.c [code]	Support vector machine model classifier
svm_tree.h [code]	Support vector machine model classifier
weka.c [code]	Definitions for a Weka J48 and PART classifiers
weka.h [code]	Weka J48 and PART classifiers
xml.h [code]	Wrapper functions and macros for the libxml2 interface