options.h

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#ifndef OPTIONS_H
#define OPTIONS_H


#include <config.h>

#include <stdlib.h>
#include <stdio.h>
#include <inttypes.h>

#include <jwsc/base/error.h>
#include <jwsc/base/option.h>
#include <jwsc/vector/vector.h>

#include "output.h"
#include "input.h"


#ifdef HAPLO_HAVE_PTHREAD
#define NUM_THREAD_OPTS 1
#else
#define NUM_THREAD_OPTS 0
#endif

#define  NUM_SHARED_OPTS_NO_ARG    4
#define  NUM_SHARED_OPTS_WITH_ARG  12 + NUM_THREAD_OPTS


struct
{
    uint8_t header_in;

    uint8_t header_out;

    uint8_t exclude_one;

    uint32_t seed;

    uint32_t num_threads;

    Haplo_input_format input_format;

    const char* input_dtd_fname;

    Haplo_output_format output_format;

    const char* labels_fname;

    const char* labels_dtd_fname;

    Vector_u32* id_cols;

    uint32_t label_col;

    uint32_t first_marker_col;

    uint32_t num_markers;

    Vector_u32* marker_cols;

    const char* aux_input_fname;

    Vector_u32* aux_id_cols;

    uint32_t aux_label_col;

    uint32_t aux_first_marker_col;

    uint32_t aux_num_markers;

    Vector_u32* aux_marker_cols;

    uint32_t num_gmm_markers;

    const char* nb_freq_fname;

    const char* nb_freq_dtd_fname;

    const char* nb_gauss_fname;

    const char* nb_gauss_dtd_fname;

    const char* nb_gmm_fname;

    const char* nb_gmm_dtd_fname;

    const char* mv_gmm_fname;

    const char* mv_gmm_dtd_fname;

    const char* mv_mmm_fname;

    const char* mv_mmm_dtd_fname;

#ifdef HAPLO_ENABLE_SVM

    const char* svm_fname;

    const char* svm_dtd_fname;
#endif

#ifdef HAPLO_ENABLE_WEKA

    const char* weka_j48_fname;

    const char* weka_part_fname;

    const char* weka_jar_fname;

    const char* weka_dtd_fname;
#endif

    const char* nearest_fname;

    const char* nearest_dtd_fname;

    uint32_t nearest_max_d;

    const char* bmm_tree_fname;

    const char* bmm_info_fname;

    const char* bmm_conf_thresh_fname;

    const char* gmm_bmm_tree_fname;

    const char* gmm_bmm_info_fname;

    const char* gmm_bmm_conf_thresh_fname;

    const char* model_dirname;
}
opts;

Error* process_exclude_one_opt();

Error* process_aux_input_opt(Option_arg arg);

Error* process_aux_id_cols_opt(Option_arg arg);

Error* process_aux_label_col_opt(Option_arg arg);

Error* process_aux_first_marker_col_opt(Option_arg arg);

Error* process_aux_num_markers_opt(Option_arg arg);

Error* process_aux_marker_cols_opt(Option_arg arg);

Error* process_num_gmm_bmm_markers_opt(Option_arg arg);

Error* process_model_dir_opt(Option_arg arg);

Error* process_nb_freq_opt(Option_arg arg);

Error* process_nb_freq_dtd_opt(Option_arg arg);

Error* process_nb_gauss_opt(Option_arg arg);

Error* process_nb_gauss_dtd_opt(Option_arg arg);

Error* process_nb_gmm_opt(Option_arg arg);

Error* process_nb_gmm_dtd_opt(Option_arg arg);

Error* process_mv_gmm_opt(Option_arg arg);

Error* process_mv_gmm_dtd_opt(Option_arg arg);

Error* process_mv_mmm_opt(Option_arg arg);

Error* process_mv_mmm_dtd_opt(Option_arg arg);

#ifdef HAPLO_ENABLE_SVM

Error* process_svm_opt(Option_arg arg);

Error* process_svm_dtd_opt(Option_arg arg);
#endif

#ifdef HAPLO_ENABLE_WEKA

Error* process_weka_j48_opt(Option_arg arg);

Error* process_weka_part_opt(Option_arg arg);

Error* process_weka_jar_opt(Option_arg arg);

Error* process_weka_dtd_opt(Option_arg arg);
#endif

Error* process_nearest_opt(Option_arg arg);

Error* process_nearest_dtd_opt(Option_arg arg);

Error* process_nearest_max_d_opt(Option_arg arg);

Error* process_bmm_tree_opt(Option_arg arg);

Error* process_bmm_info_opt(Option_arg arg);

Error* process_bmm_conf_thresh_opt(Option_arg arg);

Error* process_gmm_bmm_tree_opt(Option_arg arg);

Error* process_gmm_bmm_info_opt(Option_arg arg);

Error* process_gmm_bmm_conf_thresh_opt(Option_arg arg);

void init_options(Option_no_arg* opts_no_arg, Option_with_arg* opts_with_arg);


#endif