This is the complete list of members for Spore, including all inherited members.

add_lateral(class Lateral_structure *s)	Structure	`[inline]`
apical	Structure	`[protected]`
Apical_structure(float centroid_x, float centroid_y, float centroid_z, float length, float width, float base_theta, float base_psi, float theta, float psi, float opacity, size_t level, const class Apical_structure_density *density)	Apical_structure
Apical_structure(Structure parent, float length, float width, float base_theta, float base_psi, float theta, float psi, float opacity, const class Apical_structure_density density)	Apical_structure
Apical_structure(Structure parent, float centroid_x, float centroid_y, float centroid_z, float length, float width, float base_theta, float base_psi, float opacity, const class Apical_structure_density density)	Apical_structure
Apical_structure(const Apical_structure &s)	Apical_structure
base_psi	Structure	`[protected]`
base_theta	Structure	`[protected]`
begin_pt	Structure	`[protected]`
centroid	Structure	`[protected]`
check_base_psi() const	Structure	`[protected]`
check_base_theta() const	Structure	`[protected]`
check_centroid() const	Apical_structure	`[protected, virtual]`
check_length() const	Structure	`[protected]`
check_opacity() const	Structure	`[protected]`
check_psi() const	Structure	`[protected]`
check_theta() const	Structure	`[protected]`
check_width() const	Structure	`[protected]`
clone() const	Spore	`[virtual]`
density	Spore	`[protected]`
draw_in_matblock_f(jwsc::Matblock_f *M_blk, float x, float y, float z, float x_scale, float y_scale, float z_scale, bool fill=true) const	Spore	`[virtual]`
draw_in_matrix_f(jwsc::Matrix_f *M, float x, float y, float z, float x_scale, float y_scale, float z_scale, bool fill=true) const	Spore
draw_in_zeroed_matrix_f(jwsc::Matrix_f *M, float x, float y, float z, float x_scale, float y_scale, float z_scale, bool fill=true) const	Spore	`[protected]`
end_pt	Structure	`[protected]`
get_apical()	Structure	`[inline]`
get_base_psi() const	Structure	`[inline]`
get_base_theta() const	Structure	`[inline]`
get_begin_pt() const	Structure	`[inline]`
get_centroid() const	Structure	`[inline]`
get_density() const	Spore	`[inline]`
get_descendants()	Structure
get_end_pt() const	Structure	`[inline]`
get_growth_dir() const	Structure	`[inline]`
get_id() const	Structure	`[inline]`
get_intersection(jwsc::Vector_f *isect_out, uint32_t n, const jwsc::Vector_f p1_in, const jwsc::Vector_f *p2_in)	Spore	`[virtual]`
get_laterals()	Structure	`[inline]`
get_length() const	Structure	`[inline]`
get_level() const	Structure	`[inline]`
get_log_prob() const	Structure	`[inline]`
get_log_prob_descend() const	Structure	`[inline]`
get_member_value(const char *member_name, std::istream &in)	Printable	`[static]`
get_next_member_value(const char *member_value)	Printable	`[static]`
get_opacity() const	Structure	`[inline]`
get_parent() const	Structure	`[inline]`
get_psi() const	Structure	`[inline]`
get_random_lateral()	Structure
get_root()	Structure
get_terminal_apical()	Structure
get_theta() const	Structure	`[inline]`
get_type_str() const	Spore	`[inline, virtual]`
get_width() const	Structure	`[inline]`
growth_dir	Structure	`[protected]`
has_child_id(uint32_t id) const	Structure	`[protected]`
id	Structure	`[protected]`
Lateral_structure class	Apical_structure	`[friend]`
laterals	Structure	`[protected]`
length	Structure	`[protected]`
level	Structure	`[protected]`
log_prob	Structure	`[protected]`
log_prob_descend	Structure	`[protected]`
merge_with_apical(const Spore *rvals)	Spore
Apical_structure::merge_with_apical(const Apical_structure *rvals)	Apical_structure	`[virtual]`
merge_with_lateral(Lateral_structure lateral, const Apical_structure rvals)	Apical_structure	`[virtual]`
opacity	Structure	`[protected]`
operator=(const Spore &s)	Spore
Apical_structure::operator=(const Apical_structure &s)	Apical_structure	`[virtual]`
Structure::operator=(const Structure &s)	Structure	`[virtual]`
parent	Structure	`[protected]`
print(ostream &out=std::cout) const	Structure	`[virtual]`
Printable::print(std::ostream &out) const =0	Printable	`[pure virtual]`
psi	Structure	`[protected]`
R	Structure	`[protected]`
recursively_check_structure() const	Structure
recursively_clone() const	Apical_structure	`[virtual]`
recursively_draw_in_matblock_f(jwsc::Matblock_f *M_blk, float x, float y, float z, float x_scale, float y_scale, float z_scale, bool fill=true) const	Structure
recursively_print(ostream &out=std::cout) const	Structure
recursively_update_levels(int level_delta)	Structure	`[protected]`
recursively_update_R()	Structure	`[protected]`
remove_lateral(class Lateral_structure *s)	Structure
replace(class Apical_hypha *hypha)	Spore
Apical_structure::replace(Apical_structure *s)	Apical_structure	`[virtual]`
set_apical(class Apical_structure *s)	Structure	`[inline]`
set_base_orientation(float base_theta, float base_psi)	Structure
set_base_psi(float base_psi)	Structure
set_base_theta(float base_theta)	Structure
set_length(float length)	Structure
set_opacity(float opacity)	Structure
set_orientation(float theta, float psi)	Structure
set_position(float centroid_x, float centroid_y, float centroid_z)	Apical_structure
set_psi(float psi)	Structure
set_size(float length, float width)	Structure
set_theta(float theta)	Structure
set_width(float width)	Structure
split_into_apical(const Spore rvals_1, const Spore rvals_2)	Spore
split_into_apical(const Apical_hypha rvals_1, const Apical_hypha rvals_2)	Spore
Apical_structure::split_into_apical(const Apical_structure rvals_1, const Apical_structure rvals_2)	Apical_structure	`[virtual]`
split_into_lateral(const Apical_structure rvals_1, const Lateral_structure rvals_2)	Apical_structure	`[virtual]`
Spore(float centroid_x, float centroid_y, float centroid_z, float length, float width, float base_theta, float base_psi, float theta, float psi, float opacity, size_t level, const class Spore_density *density)	Spore
Spore(Structure parent, float length, float width, float base_theta, float base_psi, float theta, float psi, float opacity, const class Spore_density density)	Spore
Spore(Structure parent, float centroid_x, float centroid_y, float centroid_z, float length, float width, float base_theta, float base_psi, float opacity, const class Spore_density density)	Spore
Spore(const Spore &s)	Spore
Spore(const class Apical_hypha &h, float width, const Spore_density *density)	Spore
Structure class	Apical_structure	`[friend]`
Structure::Structure(float length, float width, float base_theta, float base_psi, float theta, float psi, float opacity, size_t level, const class Structure_density *density)	Structure
Structure::Structure(const Structure &s)	Structure
theta	Structure	`[protected]`
type_str()	Spore	`[inline, static]`
update_ancestry_log_prob()	Structure	`[protected]`
update_angles()	Structure	`[protected]`
update_apical()	Structure	`[protected]`
update_begin_pt()	Structure	`[protected]`
update_centroid()	Structure	`[protected]`
update_end_pt()	Structure	`[protected]`
update_from_parent_end_pt()	Apical_structure	`[protected]`
update_growth_dir_and_length_from_pts()	Structure	`[protected]`
update_growth_dir_from_R()	Structure	`[protected]`
update_laterals()	Structure	`[protected]`
update_log_prob()	Spore	`[protected, virtual]`
update_R()	Structure	`[protected]`
width	Structure	`[protected]`
~Apical_structure()	Apical_structure	`[inline, virtual]`
~Printable()	Printable	`[inline, virtual]`
~Structure()	Structure	`[virtual]`