Alternaria
fit cylinders and ellipsoids to fungus
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add_apical_hypha(Apical_hypha *h) | Alternaria | |
add_lateral_hypha(Lateral_hypha *h) | Alternaria | |
add_spore(Spore *s) | Alternaria | |
alt_d | Alternaria | [protected] |
Alternaria(float c_1, float theta, float psi, size_t base_level, const Alternaria_density *alt_d, const Spore_density *spore_d, const Apical_hypha_density *apical_hypha_d, const Lateral_hypha_density *lateral_hypha_1_d, const Lateral_hypha_density *lateral_hypha_n_d) | Alternaria | |
Alternaria(const Alternaria &alt) | Alternaria | |
Alternaria(const char *fname, const Alternaria_density *alt_d, const Spore_density *spore_d, const Apical_hypha_density *apical_hypha_d, const Lateral_hypha_density *lateral_hypha_1_d, const Lateral_hypha_density *lateral_hypha_n_d) | Alternaria | |
apical_hypha_d | Alternaria | [protected] |
base_level | Alternaria | [protected] |
build_levels(Structure *s) | Alternaria | [protected] |
c_1 | Alternaria | [protected] |
check_c_1() const | Alternaria | [protected] |
check_levels() | Alternaria | [protected] |
clone() const | Alternaria | |
ensure_level_space(size_t level) | Alternaria | [protected] |
get_alt_d() const | Alternaria | [inline] |
get_apical_hypha_d() const | Alternaria | [inline] |
get_base_level() const | Alternaria | [inline] |
get_c_1() const | Alternaria | [inline] |
get_geometric_random_level() const | Alternaria | |
get_lateral_hypha_1_d() const | Alternaria | [inline] |
get_lateral_hypha_n_d() const | Alternaria | [inline] |
get_log_prob() const | Alternaria | |
get_member_value(const char *member_name, std::istream &in) | Printable | [static] |
get_next_member_value(const char *member_value) | Printable | [static] |
get_num_apical_hypha() const | Alternaria | |
get_num_lateral_hypha() const | Alternaria | |
get_num_levels() const | Alternaria | [inline] |
get_num_spores() const | Alternaria | |
get_num_structures() const | Alternaria | |
get_psi() const | Alternaria | [inline] |
get_random_apical_hypha(size_t level) const | Alternaria | |
get_random_lateral_hypha(size_t level) const | Alternaria | |
get_random_spore(size_t level) const | Alternaria | |
get_random_structure(size_t level) const | Alternaria | |
get_random_terminal(size_t level) const | Alternaria | |
get_random_terminal_apical_hypha(size_t level) const | Alternaria | |
get_random_terminal_lateral_hypha(size_t level) const | Alternaria | |
get_random_terminal_spore(size_t level) const | Alternaria | |
get_root() const | Alternaria | [inline] |
get_spore_d() const | Alternaria | [inline] |
get_theta() const | Alternaria | [inline] |
get_uniform_random_level() const | Alternaria | |
lateral_hypha_1_d | Alternaria | [protected] |
lateral_hypha_n_d | Alternaria | [protected] |
level_apical_hypha | Alternaria | [protected] |
level_lateral_hypha | Alternaria | [protected] |
level_spores | Alternaria | [protected] |
level_structs | Alternaria | [protected] |
level_terminals | Alternaria | [protected] |
log_prob | Alternaria | [protected] |
merge_2_apical_with_spore(Apical_hypha *hypha_1, const Spore *rvals) | Alternaria | |
merge_apical_hypha_with_apical(Apical_hypha *h, const Apical_hypha *rvals) | Alternaria | |
merge_apical_hypha_with_lateral(Apical_hypha *h, Lateral_hypha *lat, const Apical_hypha *rvals) | Alternaria | |
merge_spore_with_spore(Spore *s, const Spore *rvals) | Alternaria | |
operator=(const Alternaria &alternaria) | Alternaria | [virtual] |
print(std::ostream &out=std::cout) const | Alternaria | [virtual] |
print(const char *fname) const | Alternaria | [virtual] |
psi | Alternaria | [protected] |
read(std::istream &in) | Alternaria | [protected] |
recursively_update_level(Structure *s, size_t old_level) | Alternaria | [protected] |
remove_apical_hypha(Apical_hypha *h) | Alternaria | |
remove_lateral_hypha(Lateral_hypha *h) | Alternaria | |
remove_spore(Spore *s) | Alternaria | |
replace_apical_hypha_with_spore(Apical_hypha *hypha, Spore *spore) | Alternaria | |
replace_spore_with_apical_hypha(Spore *spore, Apical_hypha *hypha) | Alternaria | |
root | Alternaria | [protected] |
set_c_1(float c_1) | Alternaria | |
set_root(Structure *root) | Alternaria | |
split_apical_hypha_into_apical(Apical_hypha *h, const Apical_hypha *rvals_1, const Apical_hypha *rvals_2) | Alternaria | |
split_apical_hypha_into_lateral(Apical_hypha *h, const Apical_hypha *rvals_1, const Lateral_hypha *rvals_2) | Alternaria | |
split_spore_into_2_apical(Spore *spore, const Apical_hypha *rvals_1, const Apical_hypha *rvals_2) | Alternaria | |
split_spore_into_spore(Spore *s, const Spore *rvals_1, const Spore *rvals_2) | Alternaria | |
spore_d | Alternaria | [protected] |
theta | Alternaria | [protected] |
~Alternaria() | Alternaria | [virtual] |
~Printable() | Printable | [inline, virtual] |