Alternaria
fit cylinders and ellipsoids to fungus
Alternaria Member List
This is the complete list of members for Alternaria, including all inherited members.
add_apical_hypha(Apical_hypha *h)Alternaria
add_lateral_hypha(Lateral_hypha *h)Alternaria
add_spore(Spore *s)Alternaria
alt_dAlternaria [protected]
Alternaria(float c_1, float theta, float psi, size_t base_level, const Alternaria_density *alt_d, const Spore_density *spore_d, const Apical_hypha_density *apical_hypha_d, const Lateral_hypha_density *lateral_hypha_1_d, const Lateral_hypha_density *lateral_hypha_n_d)Alternaria
Alternaria(const Alternaria &alt)Alternaria
Alternaria(const char *fname, const Alternaria_density *alt_d, const Spore_density *spore_d, const Apical_hypha_density *apical_hypha_d, const Lateral_hypha_density *lateral_hypha_1_d, const Lateral_hypha_density *lateral_hypha_n_d)Alternaria
apical_hypha_dAlternaria [protected]
base_levelAlternaria [protected]
build_levels(Structure *s)Alternaria [protected]
c_1Alternaria [protected]
check_c_1() const Alternaria [protected]
check_levels()Alternaria [protected]
clone() const Alternaria
ensure_level_space(size_t level)Alternaria [protected]
get_alt_d() const Alternaria [inline]
get_apical_hypha_d() const Alternaria [inline]
get_base_level() const Alternaria [inline]
get_c_1() const Alternaria [inline]
get_geometric_random_level() const Alternaria
get_lateral_hypha_1_d() const Alternaria [inline]
get_lateral_hypha_n_d() const Alternaria [inline]
get_log_prob() const Alternaria
get_member_value(const char *member_name, std::istream &in)Printable [static]
get_next_member_value(const char *member_value)Printable [static]
get_num_apical_hypha() const Alternaria
get_num_lateral_hypha() const Alternaria
get_num_levels() const Alternaria [inline]
get_num_spores() const Alternaria
get_num_structures() const Alternaria
get_psi() const Alternaria [inline]
get_random_apical_hypha(size_t level) const Alternaria
get_random_lateral_hypha(size_t level) const Alternaria
get_random_spore(size_t level) const Alternaria
get_random_structure(size_t level) const Alternaria
get_random_terminal(size_t level) const Alternaria
get_random_terminal_apical_hypha(size_t level) const Alternaria
get_random_terminal_lateral_hypha(size_t level) const Alternaria
get_random_terminal_spore(size_t level) const Alternaria
get_root() const Alternaria [inline]
get_spore_d() const Alternaria [inline]
get_theta() const Alternaria [inline]
get_uniform_random_level() const Alternaria
lateral_hypha_1_dAlternaria [protected]
lateral_hypha_n_dAlternaria [protected]
level_apical_hyphaAlternaria [protected]
level_lateral_hyphaAlternaria [protected]
level_sporesAlternaria [protected]
level_structsAlternaria [protected]
level_terminalsAlternaria [protected]
log_probAlternaria [protected]
merge_2_apical_with_spore(Apical_hypha *hypha_1, const Spore *rvals)Alternaria
merge_apical_hypha_with_apical(Apical_hypha *h, const Apical_hypha *rvals)Alternaria
merge_apical_hypha_with_lateral(Apical_hypha *h, Lateral_hypha *lat, const Apical_hypha *rvals)Alternaria
merge_spore_with_spore(Spore *s, const Spore *rvals)Alternaria
operator=(const Alternaria &alternaria)Alternaria [virtual]
print(std::ostream &out=std::cout) const Alternaria [virtual]
print(const char *fname) const Alternaria [virtual]
psiAlternaria [protected]
read(std::istream &in)Alternaria [protected]
recursively_update_level(Structure *s, size_t old_level)Alternaria [protected]
remove_apical_hypha(Apical_hypha *h)Alternaria
remove_lateral_hypha(Lateral_hypha *h)Alternaria
remove_spore(Spore *s)Alternaria
replace_apical_hypha_with_spore(Apical_hypha *hypha, Spore *spore)Alternaria
replace_spore_with_apical_hypha(Spore *spore, Apical_hypha *hypha)Alternaria
rootAlternaria [protected]
set_c_1(float c_1)Alternaria
set_root(Structure *root)Alternaria
split_apical_hypha_into_apical(Apical_hypha *h, const Apical_hypha *rvals_1, const Apical_hypha *rvals_2)Alternaria
split_apical_hypha_into_lateral(Apical_hypha *h, const Apical_hypha *rvals_1, const Lateral_hypha *rvals_2)Alternaria
split_spore_into_2_apical(Spore *spore, const Apical_hypha *rvals_1, const Apical_hypha *rvals_2)Alternaria
split_spore_into_spore(Spore *s, const Spore *rvals_1, const Spore *rvals_2)Alternaria
spore_dAlternaria [protected]
thetaAlternaria [protected]
~Alternaria()Alternaria [virtual]
~Printable()Printable [inline, virtual]