NB_freq_model Struct Reference

Naive Bayes non-parametric marker frequency model. More...

#include <nb_freq.h>

Collaboration diagram for NB_freq_model:

Data Fields
uint32_t	num_markers
	Number of markers.
uint32_t	min_marker_val
	Minimum marker value.
uint32_t	num_marker_vals
	Number of integer marker values.
Matrix_d *	marker_given_label
	Likelihood table for the ith marker given a label.
Vector_d *	priors
	Prior probabilities over the labels.

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Detailed Description

Naive Bayes non-parametric marker frequency model.

Definition at line 61 of file nb_freq.h.

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Field Documentation

uint32_t NB_freq_model::num_markers

Number of markers.

Definition at line 64 of file nb_freq.h.

uint32_t NB_freq_model::min_marker_val

Minimum marker value.

Definition at line 67 of file nb_freq.h.

uint32_t NB_freq_model::num_marker_vals

Number of integer marker values.

Definition at line 70 of file nb_freq.h.

Matrix_d* NB_freq_model::marker_given_label

Likelihood table for the ith marker given a label.

Definition at line 73 of file nb_freq.h.

Vector_d* NB_freq_model::priors

Prior probabilities over the labels.

Priors are either calculated from the frequency of training data or supplied by the user.

Definition at line 81 of file nb_freq.h.

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The documentation for this struct was generated from the following file:

• nb_freq.h